STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000050543Crystallin beta-gamma domain containing 1a. (1828 aa)    
Predicted Functional Partners:
ENSCHAP00000017330
Protein phosphatase 2, regulatory subunit B', delta.
    
   0.630
ENSCHAP00000017833
annotation not available
    
   0.630
ENSCHAP00000047644
annotation not available
    
   0.630
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
   0.630
ENSCHAP00000008299
annotation not available
    
   0.568
ENSCHAP00000008367
annotation not available
    
   0.568
ENSCHAP00000012702
annotation not available
    
   0.568
ppp2r5e
Protein phosphatase 2 regulatory subunit B'epsilon.
    
   0.568
ppp2r5b
Protein phosphatase 2 regulatory subunit B'beta.
    
   0.568
ENSCHAP00000045294
Protein phosphatase 2, regulatory subunit B', alpha isoform.
    
   0.568
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.