STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105888908Glucose-induced degradation protein 4 homolog. (217 aa)    
Predicted Functional Partners:
ENSCHAP00000030516
Armadillo repeat containing 8.
    
 0.991
ENSCHAP00000021049
Required for meiotic nuclear division 5 homolog B.
    
 0.970
LOC105906441
Glucose-induced degradation protein 8 homolog.
    
 0.970
gid8
GID complex subunit 8 homolog.
    
 0.970
ENSCHAP00000031015
RAN binding protein 10.
    
 0.932
ENSCHAP00000049468
RAN binding protein 9.
    
 0.932
ENSCHAP00000049774
annotation not available
    
 0.932
ENSCHAP00000049906
RAN binding protein 9.
    
 0.932
WDR26
WD repeat domain 26.
    
 0.917
ENSCHAP00000019896
annotation not available
    
 0.917
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.