STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apobApolipoprotein B. (4373 aa)    
Predicted Functional Partners:
ENSCHAP00000016490
Intersectin 2b.
     
 0.981
ENSCHAP00000057857
Intersectin 2a.
     
 0.981
ENSCHAP00000037430
Microsomal triglyceride transfer protein.
   
 0.968
LOC105896398
Apolipoprotein Eb-like.
   
 0.888
LOC105901460
Apolipoprotein Eb-like.
   
 0.873
ENSCHAP00000054324
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.866
LOC105896373
Apolipoprotein A-IV-like.
   
 0.864
ENSCHAP00000012258
annotation not available
   
 0.864
ENSCHAP00000012278
annotation not available
   
 0.864
LOC105896364
Apolipoprotein A-IV-like.
   
 0.864
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.