STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
meiobMeiosis specific with OB-fold. (466 aa)    
Predicted Functional Partners:
ENSCHAP00000024514
WRN RecQ like helicase.
    
 0.999
ENSCHAP00000054339
annotation not available
   
 0.999
ENSCHAP00000005649
Replication protein A3.
   
 0.993
rad52
RAD52 homolog, DNA repair protein.
    
 0.988
DNA2
DNA replication helicase/nuclease 2.
    
 0.986
ENSCHAP00000038241
ATR serine/threonine kinase.
    
 0.983
ENSCHAP00000031246
Minichromosome maintenance 9 homologous recombination repair factor.
   
 0.978
ENSCHAP00000057806
DNA topoisomerase III beta.
   
 0.975
ENSCHAP00000014529
annotation not available
    
 0.971
pcna
Proliferating cell nuclear antigen.
   
 0.971
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.