STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000050934Ligand of numb-protein X 2b. (710 aa)    
Predicted Functional Partners:
ENSCHAP00000008881
Angiomotin.
    
 0.758
LOC105909465
MAGUK p55 subfamily member 5-A-like.
    
 0.757
ENSCHAP00000011993
Membrane protein, palmitoylated 7a (MAGUK p55 subfamily member 7).
    
 0.757
ENSCHAP00000024343
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5).
    
 0.757
ENSCHAP00000028538
Membrane protein, palmitoylated 3a (MAGUK p55 subfamily member 3).
    
 0.757
ENSCHAP00000034552
Membrane protein, palmitoylated 3b (MAGUK p55 subfamily member 3).
    
 0.757
ENSCHAP00000044604
Membrane protein, palmitoylated 7b (MAGUK p55 subfamily member 7).
    
 0.757
ENSCHAP00000004032
annotation not available
    
 0.751
ENSCHAP00000033353
TNF receptor-associated factor 3 interacting protein 1.
    
 0.735
ENSCHAP00000041859
annotation not available
    
0.730
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.