STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2g2Ubiquitin conjugating enzyme E2 G2. (165 aa)    
Predicted Functional Partners:
ENSCHAP00000001290
Autocrine motility factor receptor a.
    
 0.993
ENSCHAP00000052133
Synovial apoptosis inhibitor 1, synoviolin.
    
 0.993
ENSCHAP00000000456
annotation not available
   
 
 0.991
ENSCHAP00000046650
CCR4-NOT transcription complex, subunit 2.
    
 0.979
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.979
ENSCHAP00000022686
AUP1 lipid droplet regulating VLDL assembly factor.
    
 
 0.977
ENSCHAP00000030291
Ubiquitin B.
    
 0.971
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
     
 0.961
ENSCHAP00000039558
Ubiquitin-like modifier activating enzyme 1.
    
 0.956
ENSCHAP00000043307
Ubiquitin-like modifier activating enzyme 7.
    
 0.956
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.