STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lhfpl2LHFPL tetraspan subfamily member 2. (223 aa)    
Predicted Functional Partners:
aplp2
Amyloid beta precursor like protein 2.
     
 0.666
ENSCHAP00000005465
Protocadherin 7b.
    
  0.606
ENSCHAP00000015245
Protocadherin 1b.
    
  0.606
ENSCHAP00000044088
Protocadherin 7a.
    
  0.606
ENSCHAP00000059425
Protocadherin 1a.
    
  0.606
ENSCHAP00000027918
CD36 molecule (thrombospondin receptor).
   
 
  0.589
ENSCHAP00000020649
Synaptotagmin-like 4.
     
 0.572
ENSCHAP00000046714
Synaptotagmin-like 3.
     
 0.572
ENSCHAP00000033022
Amyloid beta (A4) precursor protein b.
     
 0.568
APP
Amyloid beta precursor protein.
     
 0.568
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.