STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000051335ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1. (209 aa)    
Predicted Functional Partners:
ENSCHAP00000029970
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.731
ENSCHAP00000003796
beta-1,4-N-acetyl-galactosaminyl transferase 1a.
     
 0.720
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
     
 0.654
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
     
 0.654
ENSCHAP00000031632
ST3 beta-galactoside alpha-2,3-sialyltransferase 8.
     
 0.654
LOC105892436
Beta-hexosaminidase subunit alpha-like.
     
 0.647
ENSCHAP00000022769
Hexosaminidase B (beta polypeptide).
     
 0.647
ENSCHAP00000040387
annotation not available
     
 0.593
ENSCHAP00000044987
annotation not available
     
 0.593
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.567
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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