STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000051636Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta. (588 aa)    
Predicted Functional Partners:
ENSCHAP00000009119
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
0.900
ENSCHAP00000048333
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
0.900
rel
REL proto-oncogene, NF-kB subunit.
   
 0.841
ENSCHAP00000008309
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.841
rela
RELA proto-oncogene, NF-kB subunit.
   
 0.841
LOC105892972
NF-kappa-B inhibitor alpha-like.
   
0.764
nfkbia
NFKB inhibitor alpha.
   
0.764
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.734
tnfaip3
TNF alpha induced protein 3.
   
 
 0.707
ift81
Intraflagellar transport 81.
    
 0.648
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.