STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grk6G protein-coupled receptor kinase 6. (575 aa)    
Predicted Functional Partners:
cxcr1
C-X-C motif chemokine receptor 1.
    
 0.885
LOC105912404
C-X-C chemokine receptor type 4-like.
    
 0.884
CXCR4
C-X-C motif chemokine receptor 4.
    
 0.884
ENSCHAP00000003451
Chemokine (C-X-C motif) receptor 1.
    
 0.880
LOC105904870
Arrestin red cell isoform 1-like.
   
 0.859
LOC105902401
Arrestin red cell isoform 1.
   
 0.859
ENSCHAP00000018535
Arrestin, beta 1.
   
 0.856
GNG4
G protein subunit gamma 4.
    
 0.798
csnk1a1
Casein kinase 1 alpha 1.
     
 0.772
ENSCHAP00000027696
Casein kinase 1, gamma 2a.
     
 0.766
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.