STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000051740Heat shock protein 12A. (430 aa)    
Predicted Functional Partners:
ENSCHAP00000060131
Cyclin G associated kinase.
    
 0.922
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.867
ENSCHAP00000000456
annotation not available
   
 0.865
ENSCHAP00000012175
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.852
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.848
grpel2
GrpE like 2, mitochondrial.
  
 0.812
grpel1
GrpE like 1, mitochondrial.
  
 0.809
ENSCHAP00000002550
TNF receptor-associated protein 1.
  
 0.744
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.744
ENSCHAP00000029858
TSC complex subunit 1a.
  
 0.744
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.