STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105905572Chromosome unknown open reading frame, human C11orf58. (174 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1-like.
   
    0.798
ENSCHAP00000052411
S-phase kinase-associated protein 1.
   
    0.798
cdc123
Cell division cycle 123.
   
    0.775
ENSCHAP00000014224
SUB1 regulator of transcription a.
   
    0.625
ENSCHAP00000017629
annotation not available
   
    0.625
ENSCHAP00000055257
SUB1 regulator of transcription b.
   
    0.625
LOC105905535
PEST proteolytic signal-containing nuclear protein-like.
   
    0.520
ENSCHAP00000007825
NEDD8 ubiquitin like modifier, like.
   
    0.472
ENSCHAP00000048207
Phosphorylated adaptor for RNA export.
   
    0.457
ENSCHAP00000028031
ECRG4 augurin precursor b.
      
 0.430
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.