STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000052017FERM and PDZ domain containing 3. (1659 aa)    
Predicted Functional Partners:
ENSCHAP00000027514
annotation not available
    
 
 0.676
LOC105910725
G-protein-signaling modulator 2-like.
    
 
 0.676
ENSCHAP00000042909
Oxidative stress induced growth inhibitor family member 2.
      
 0.532
LOC105913407
Protein phosphatase 1H-like.
      
 0.480
ENSCHAP00000008942
G protein signaling modulator 1b.
    
 
 0.462
ENSCHAP00000011714
annotation not available
    
 
 0.462
ENSCHAP00000036771
SH3 and cysteine rich domain.
      
 0.453
ENSCHAP00000004299
annotation not available
    
 
 0.428
ENSCHAP00000015955
Tetratricopeptide repeat domain 29.
    
 
 0.428
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.