STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000052080Hyaluronidase 3. (480 aa)    
Predicted Functional Partners:
ENSCHAP00000016490
Intersectin 2b.
    
 0.915
ENSCHAP00000057857
Intersectin 2a.
    
 0.915
ENSCHAP00000027480
Glucuronidase, beta.
     
 0.877
idua
alpha-L-iduronidase.
    
 0.868
ENSCHAP00000000387
annotation not available
    
 0.865
ENSCHAP00000035267
Intersectin 1 (SH3 domain protein).
    
 0.865
ENSCHAP00000049229
Coatomer protein complex, subunit gamma 2.
    
 0.816
ENSCHAP00000052596
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.814
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
 0.808
ENSCHAP00000060131
Cyclin G associated kinase.
    
 0.799
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.