STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000052411S-phase kinase-associated protein 1. (166 aa)    
Predicted Functional Partners:
ENSCHAP00000011503
Lysine (K)-specific demethylase 2Ab.
   
 0.997
ENSCHAP00000020096
Lysine (K)-specific demethylase 2Ba.
   
 0.997
ENSCHAP00000021011
Zgc:158376.
   
 0.997
ENSCHAP00000046845
Lysine (K)-specific demethylase 2Bb.
   
 0.997
ENSCHAP00000057236
Lysine (K)-specific demethylase 2Aa.
   
 0.997
rbx1
Ring-box 1.
   
 0.994
skp2
S-phase kinase associated protein 2.
    
 0.994
fbxo22
F-box protein 22.
    
 0.991
ENSCHAP00000045613
F-box and leucine-rich repeat protein 5.
    
 0.988
fbxo9
F-box protein 9.
    
 0.986
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.