STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105905655Claudin-22-like. (218 aa)    
Predicted Functional Partners:
ENSCHAP00000004522
Danio rerio inturned planar cell polarity protein (intu), mRNA.
   
 0.876
CLDN20
Claudin 20.
  
  
  0.876
FZR1
Fizzy-related protein homolog.
   
 0.876
ENSCHAP00000048563
Fizzy/cell division cycle 20 related 1b.
   
 0.876
ENSCHAP00000041859
annotation not available
   
  0.865
ENSCHAP00000024297
Tight junction protein 3.
    
 0.861
ENSCHAP00000000072
Claudin i.
  
  
 
0.859
cldn7
Claudin 7.
  
  
 
0.858
CLDN20-2
Claudin 20.
  
  
 
0.858
LOC105891316
Claudin-7-like.
  
  
 
0.858
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.