STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105889520Heterogeneous nuclear ribonucleoprotein C-like. (323 aa)    
Predicted Functional Partners:
ENSCHAP00000043344
annotation not available
   
 0.978
LOC105890375
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.960
ENSCHAP00000054417
Heterogeneous nuclear ribonucleoprotein K.
   
 0.960
ENSCHAP00000032571
RNA binding motif protein X-linked.
   
0.952
srsf3
Serine and arginine rich splicing factor 3.
   
 0.950
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.931
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.931
srsf1
Serine and arginine rich splicing factor 1.
   
 0.924
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.905
srsf7
Serine and arginine rich splicing factor 7.
   
 0.882
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.