STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gartannotation not available (1018 aa)    
Predicted Functional Partners:
ppat
Phosphoribosyl pyrophosphate amidotransferase.
 0.999
shmt2
Serine hydroxymethyltransferase 2.
  
 0.999
ENSCHAP00000025842
annotation not available
  
 0.999
ENSCHAP00000054107
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
 
 0.999
ENSCHAP00000006947
annotation not available
 
 0.997
LOC105908326
C-1-tetrahydrofolate synthase, cytoplasmic-like.
 
 0.997
ENSCHAP00000041970
annotation not available
 
 
 0.996
ENSCHAP00000040069
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
 
 
 0.995
ENSCHAP00000002600
MYB binding protein (P160) 1a.
   
  
 0.992
aprt
Adenine phosphoribosyltransferase.
  
 0.989
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.