STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105904953Diacylglycerol O-acyltransferase 1-like. (509 aa)    
Predicted Functional Partners:
dgat2
Diacylglycerol O-acyltransferase 2.
    
 0.949
ENSCHAP00000037701
Monoacylglycerol O-acyltransferase 3a.
   
 0.923
ENSCHAP00000001742
Monoacylglycerol O-acyltransferase 3b.
    
 0.922
mogat2
Monoacylglycerol O-acyltransferase 2.
   
 0.884
LOC105891210
Cytochrome P450 26A1.
    
 0.868
LOC105908416
Retinol dehydrogenase 12-like.
   
 
 0.859
LOC105896832
Retinol dehydrogenase 11-like.
   
 
 0.859
LOC105910894
Retinol dehydrogenase 11-like.
   
 
 0.859
ENSCHAP00000034828
annotation not available
    
 0.858
ENSCHAP00000017979
Alcohol dehydrogenase 5.
   
 
 0.857
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.