STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000052634annotation not available (289 aa)    
Predicted Functional Partners:
ENSCHAP00000054339
annotation not available
    
 0.894
ENSCHAP00000011619
annotation not available
 
     0.819
ENSCHAP00000005867
annotation not available
 
     0.785
ENSCHAP00000038207
annotation not available
 
     0.724
ENSCHAP00000000084
annotation not available
 
     0.723
ENSCHAP00000048605
annotation not available
 
     0.717
ENSCHAP00000057296
annotation not available
 
     0.703
ENSCHAP00000039528
annotation not available
 
     0.643
ENSCHAP00000013254
annotation not available
 
     0.627
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.609
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.