STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105903190Proteinase-activated receptor 4-like. (377 aa)    
Predicted Functional Partners:
ENSCHAP00000003371
Zgc:92590.
    
  0.761
LOC105910639
Trypsin-like.
    
  0.758
LOC105910609
Trypsin-2-like.
    
  0.740
ENSCHAP00000041859
annotation not available
    
  0.720
agt
Angiotensinogen.
    
  0.718
lpar1
Lysophosphatidic acid receptor 1.
    
  0.695
ENSCHAP00000048772
Lysophosphatidic acid receptor 2b.
    
  0.695
ENSCHAP00000002659
annotation not available
    
  0.688
ENSCHAP00000012481
annotation not available
    
  0.686
ENSCHAP00000000263
Zmp:0000001088.
    
  0.667
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.