ENSCHAP00000053101 protein (Clupea harengus)

Nodes:

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000053101

annotation not available (457 aa)

Predicted Functional Partners:

ppp6c

0.815

leo1

0.734

ENSCHAP00000022547

0.702

PPP6R2

0.702

ENSCHAP00000059249

0.702

ift81

0.648

rps3

0.629

ENSCHAP00000007825

0.628

mars1

0.611

rel

0.608

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000007825	ENSCHAP00000053101	ENSCHAP00000007825	ENSCHAP00000053101	NEDD8 ubiquitin like modifier, like.	annotation not available	0.628
ENSCHAP00000007825	leo1	ENSCHAP00000007825	ENSCHAP00000004560	NEDD8 ubiquitin like modifier, like.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.658
ENSCHAP00000007825	rps3	ENSCHAP00000007825	ENSCHAP00000032981	NEDD8 ubiquitin like modifier, like.	Ribosomal protein S3.	0.904
ENSCHAP00000022547	ENSCHAP00000053101	ENSCHAP00000022547	ENSCHAP00000053101	Protein phosphatase 6, regulatory subunit 2a.	annotation not available	0.702
ENSCHAP00000022547	ppp6c	ENSCHAP00000022547	ENSCHAP00000020427	Protein phosphatase 6, regulatory subunit 2a.	Protein phosphatase 6 catalytic subunit.	0.976
ENSCHAP00000053101	ENSCHAP00000007825	ENSCHAP00000053101	ENSCHAP00000007825	annotation not available	NEDD8 ubiquitin like modifier, like.	0.628
ENSCHAP00000053101	ENSCHAP00000022547	ENSCHAP00000053101	ENSCHAP00000022547	annotation not available	Protein phosphatase 6, regulatory subunit 2a.	0.702
ENSCHAP00000053101	ENSCHAP00000059249	ENSCHAP00000053101	ENSCHAP00000059249	annotation not available	Protein phosphatase 6, regulatory subunit 3.	0.702
ENSCHAP00000053101	PPP6R2	ENSCHAP00000053101	ENSCHAP00000029403	annotation not available	Protein phosphatase 6 regulatory subunit 2.	0.702
ENSCHAP00000053101	ift81	ENSCHAP00000053101	ENSCHAP00000054265	annotation not available	Intraflagellar transport 81.	0.648
ENSCHAP00000053101	leo1	ENSCHAP00000053101	ENSCHAP00000004560	annotation not available	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.734
ENSCHAP00000053101	mars1	ENSCHAP00000053101	ENSCHAP00000036065	annotation not available	methionyl-tRNA synthetase 1.	0.611
ENSCHAP00000053101	ppp6c	ENSCHAP00000053101	ENSCHAP00000020427	annotation not available	Protein phosphatase 6 catalytic subunit.	0.815
ENSCHAP00000053101	rel	ENSCHAP00000053101	ENSCHAP00000005729	annotation not available	REL proto-oncogene, NF-kB subunit.	0.608
ENSCHAP00000053101	rps3	ENSCHAP00000053101	ENSCHAP00000032981	annotation not available	Ribosomal protein S3.	0.629
ENSCHAP00000059249	ENSCHAP00000053101	ENSCHAP00000059249	ENSCHAP00000053101	Protein phosphatase 6, regulatory subunit 3.	annotation not available	0.702
ENSCHAP00000059249	ppp6c	ENSCHAP00000059249	ENSCHAP00000020427	Protein phosphatase 6, regulatory subunit 3.	Protein phosphatase 6 catalytic subunit.	0.976
PPP6R2	ENSCHAP00000053101	ENSCHAP00000029403	ENSCHAP00000053101	Protein phosphatase 6 regulatory subunit 2.	annotation not available	0.702
PPP6R2	ppp6c	ENSCHAP00000029403	ENSCHAP00000020427	Protein phosphatase 6 regulatory subunit 2.	Protein phosphatase 6 catalytic subunit.	0.976
ift81	ENSCHAP00000053101	ENSCHAP00000054265	ENSCHAP00000053101	Intraflagellar transport 81.	annotation not available	0.648