STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000053143Tissue factor pathway inhibitor a. (320 aa)    
Predicted Functional Partners:
ENSCHAP00000005745
Coagulation factor VII, like.
    
 0.806
ENSCHAP00000005881
Coagulation factor VII.
    
 0.806
LOC105896532
Coagulation factor X-like.
    
 0.806
ENSCHAP00000033974
Coagulation factor IXa.
    
 0.806
LOC105907419
Coagulation factor IX-like.
    
 0.806
ENSCHAP00000053128
annotation not available
    
 0.806
ENSCHAP00000035123
Protein C (inactivator of coagulation factors Va and VIIIa), a.
    
 0.765
ENSCHAP00000000263
Zmp:0000001088.
    
  0.761
ENSCHAP00000001291
annotation not available
    
  0.761
LOC105891888
Trypsin-3-like.
    
  0.761
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.