STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891210Cytochrome P450 26A1. (490 aa)    
Predicted Functional Partners:
ENSCHAP00000044484
Aldehyde dehydrogenase 1 family, member A2.
   
 
 0.928
LOC105900613
Retinol dehydrogenase 10-B-like.
   
 
 0.926
LOC105894275
Short-chain dehydrogenase/reductase 3-like.
   
 
 0.921
ENSCHAP00000048638
Retinol dehydrogenase 10a.
   
 
 0.906
LOC105912206
Short-chain dehydrogenase/reductase 3-like.
   
 
 0.905
ENSCHAP00000042044
annotation not available
   
 
 0.901
ENSCHAP00000046008
Aldehyde dehydrogenase 1 family, member A3.
   
 
 0.901
ENSCHAP00000001540
Cytochrome P450, family 27, subfamily C, polypeptide 1.
  
 
0.894
ENSCHAP00000002442
Cytochrome P450, family 1, subfamily A.
  
0.888
ENSCHAP00000002668
Retinol dehydrogenase 1.
   
 0.888
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.