STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAP1Caspase activity and apoptosis inhibitor 1. (333 aa)    
Predicted Functional Partners:
plaa
Phospholipase A2 activating protein.
 
 
  
 0.653
ENSCHAP00000003304
A kinase (PRKA) anchor protein 17A.
    
   0.575
ENSCHAP00000021215
Zinc finger, SWIM-type containing 8.
      
 0.523
ENSCHAP00000048002
Sorting nexin 13.
      
 0.521
bfar
Bifunctional apoptosis regulator.
      
 0.519
ENSCHAP00000036555
Thyroid hormone receptor interactor 11.
      
 0.444
ENSCHAP00000024305
TNFAIP3 interacting protein 1.
      
 0.438
gadd45gip1
GADD45G interacting protein 1.
      
 0.405
ENSCHAP00000024505
Sec1 family domain containing 1.
      
 0.403
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.