STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000053428annotation not available (1126 aa)    
Predicted Functional Partners:
ENSCHAP00000011131
Angiopoietin 2b.
   
 0.956
ENSCHAP00000017905
Platelet derived growth factor c.
    
 0.920
ENSCHAP00000024537
annotation not available
    
 0.913
ENSCHAP00000049882
Kit ligand a.
    
 0.908
ENSCHAP00000034215
Angiopoietin 2a.
   
 0.906
ENSCHAP00000014803
annotation not available
    
 0.903
ENSCHAP00000043467
Angiopoietin 4.
   
 0.902
vegfc
Vascular endothelial growth factor C.
    
 0.898
fgf2
Fibroblast growth factor 2.
    
 0.896
ENSCHAP00000015478
Vascular endothelial growth factor Aa.
    
 0.894
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.