STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCitrate synthase. (521 aa)    
Predicted Functional Partners:
ENSCHAP00000000013
annotation not available
  
 0.993
mdh2
Malate dehydrogenase 2.
  
 0.991
LOC105909048
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
  
 0.991
ACO2
Aconitase 2.
  
 0.987
ENSCHAP00000016319
succinate-CoA ligase, ADP-forming, beta subunit.
  
 0.986
ENSCHAP00000025183
Aconitase 1, soluble.
  
 0.985
suclg1
succinate-CoA ligase alpha subunit.
  
 0.984
suclg2
succinate-CoA ligase GDP-forming beta subunit.
  
 0.981
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
  
 0.979
LOC105898957
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like.
  
 0.979
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.