STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105901077Uncharacterized family 31 glucosidase KIAA1161-like. (688 aa)    
Predicted Functional Partners:
ENSCHAP00000025747
Protein kinase C substrate 80K-H.
   
 0.802
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.802
ENSCHAP00000053617
annotation not available
   
 0.802
NUP54
Nucleoporin 54.
    
 0.710
mogs
Mannosyl-oligosaccharide glucosidase.
   
 0.686
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.672
ENSCHAP00000014065
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
    
 0.662
ENSCHAP00000009689
annotation not available
    
 0.650
LOC105903101
Glycogen phosphorylase, muscle form-like.
    
 0.650
pygb
Glycogen phosphorylase B.
    
 0.650
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.