STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105910078Cyclin-dependent kinase 17-like. (543 aa)    
Predicted Functional Partners:
ENSCHAP00000004522
Danio rerio inturned planar cell polarity protein (intu), mRNA.
   
 0.894
FZR1
Fizzy-related protein homolog.
   
 0.894
ENSCHAP00000048563
Fizzy/cell division cycle 20 related 1b.
   
 0.894
ENSCHAP00000056266
Origin recognition complex, subunit 2.
 
 
 0.891
ccna1
Cyclin A1.
   
 0.883
ccna2
Cyclin A2.
   
 0.883
ENSCHAP00000004848
Cyclin Y.
    
 0.873
cdc23
Cell division cycle 23.
    
 0.868
ENSCHAP00000007499
CDC28 protein kinase regulatory subunit 2.
   
 0.866
cks2
CDC28 protein kinase regulatory subunit 2.
   
 0.866
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.