STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000053846annotation not available (134 aa)    
Predicted Functional Partners:
dynlt1
Dynein light chain Tctex-type 1.
    
 0.943
ENSCHAP00000031615
Dynein, light chain, roadblock-type 1.
   
 0.884
dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.798
dnal4
Dynein axonemal light chain 4.
    
 0.731
LOC105898470
Dynein light chain 2, cytoplasmic-like.
    
 0.731
DYNLL2
Dynein light chain 2, cytoplasmic.
    
 0.731
ENSCHAP00000060760
Intraflagellar transport 52 homolog (Chlamydomonas).
     
 0.661
WDR63
WD repeat domain 63.
    
 0.654
ENSCHAP00000015252
WD repeat domain 78.
    
 0.654
ENSCHAP00000018606
WD repeat domain 60.
    
 0.654
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.