STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000053982Lactase-like a. (582 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23.
    
 0.876
fgf19
Fibroblast growth factor 19.
    
 0.859
ENSCHAP00000000147
Fibroblast growth factor 21.
    
 0.757
ENSCHAP00000004468
Cullin 2.
    
 0.747
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.731
galm
Galactose mutarotase.
  
 
 0.728
gale
UDP-galactose-4-epimerase.
    
 0.714
ENSCHAP00000060066
Fibroblast growth factor receptor 1b.
   
 0.702
ENSCHAP00000048274
Fibroblast growth factor receptor 3.
   
 0.698
ENSCHAP00000061797
annotation not available
   
 0.698
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.