STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054037annotation not available (175 aa)    
Predicted Functional Partners:
ENSCHAP00000054030
Actinoporin-like protein.
  
 
 
0.938
LOC105898641
Cytolysin RTX-A-like.
  
  
 
0.925
ENSCHAP00000006298
annotation not available
  
  
 
0.814
ENSCHAP00000030988
Complement component 6.
   
 
  0.779
ENSCHAP00000004719
DAB adaptor protein 1b.
   
 
  0.519
ENSCHAP00000046953
annotation not available
   
 
  0.519
ENSCHAP00000058804
FYN binding protein b.
   
 
  0.519
ENSCHAP00000059846
Si:ch211-204c21.1.
   
 
  0.519
ENSCHAP00000061149
DAB adaptor protein 1a.
   
 
  0.519
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.