STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054101Adenylate cyclase 1a. (1099 aa)    
Predicted Functional Partners:
gnas
GNAS complex locus.
   
 0.931
ENSCHAP00000037565
annotation not available
   
 0.930
ENSCHAP00000054661
Phosphodiesterase 3B.
    
 0.897
LOC105899109
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.892
LOC105897337
Guanine nucleotide-binding protein G(k) subunit alpha.
    
 0.889
CALML6
Calmodulin like 6.
    
 0.889
ENSCHAP00000003253
annotation not available
    
 0.887
gnai1
G protein subunit alpha i1.
    
 0.887
pde6a
Phosphodiesterase 6A.
    
 0.887
pde4c
Phosphodiesterase 4C.
    
 0.887
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.