STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdonCell adhesion associated, oncogene regulated. (1230 aa)    
Predicted Functional Partners:
ENSCHAP00000001958
Desert hedgehog signaling molecule.
    
 0.973
ENSCHAP00000061101
Sonic hedgehog signaling molecule b.
    
 0.973
ENSCHAP00000002688
Indian hedgehog signaling molecule b.
    
 0.957
ENSCHAP00000047401
Indian hedgehog signaling molecule a.
    
 0.957
ptch2
Patched 2.
    
 0.937
ENSCHAP00000061427
Growth arrest-specific 1a.
    
 0.901
PTCH1
Patched 1.
    
 0.897
PTCH1-2
Patched 1.
    
 0.897
LOC105888612
Growth arrest-specific protein 1-like.
     
 0.888
ENSCHAP00000008499
Low density lipoprotein receptor-related protein 2a.
     
 0.867
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.