STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054310Diphthamide biosynthesis 5. (290 aa)    
Predicted Functional Partners:
dph1
Diphthamide biosynthesis 1.
   
 0.954
dph2
Diphthamide biosynthesis 2.
   
 0.953
ENSCHAP00000003718
Diphthamine biosynthesis 6.
  
 
 0.946
LOC105901172
Elongation factor 2-like.
    
 0.924
eef2
Eukaryotic translation elongation factor 2.
    
 0.924
efl1
Elongation factor like GTPase 1.
    
 0.853
ENSCHAP00000022746
G elongation factor, mitochondrial 1.
    
 0.853
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.853
gmps
Guanine monophosphate synthase.
   
  
 0.750
ENSCHAP00000054063
RNA 3'-terminal phosphate cyclase.
   
  
 0.742
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.