STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054400Sulfatase 2b. (954 aa)    
Predicted Functional Partners:
ENSCHAP00000027480
Glucuronidase, beta.
  
 0.809
ENSCHAP00000027704
annotation not available
    
 0.809
ENSCHAP00000048371
Mediator complex subunit 14.
    
 0.809
med6
Mediator complex subunit 6.
    
 0.806
ENSCHAP00000051830
annotation not available
    
 0.802
med21
Mediator complex subunit 21.
   
 0.793
med10
Mediator complex subunit 10.
    
 0.771
ENSCHAP00000001674
Mediator complex subunit 31.
    
 0.719
ENSCHAP00000023324
Mannosidase, beta A, lysosomal.
  
 0.719
LOC105899203
Mediator of RNA polymerase II transcription subunit 31-like.
    
 0.719
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.