STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054553annotation not available (170 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.987
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
 0.987
ENSCHAP00000008118
Vesicle-associated membrane protein 2.
   
 0.877
ENSCHAP00000008243
annotation not available
   
 0.877
ENSCHAP00000048391
annotation not available
   
 0.877
snap25
Synaptosome associated protein 25.
   
 0.877
STX3
Syntaxin 3.
   
 0.845
ENSCHAP00000006011
annotation not available
   
 0.845
ENSCHAP00000010745
annotation not available
   
 0.845
LOC105913027
syntaxin-1B.
   
 0.845
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.