STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pop7POP7 homolog, ribonuclease P/MRP subunit. (152 aa)    
Predicted Functional Partners:
ENSCHAP00000002553
Ribonuclease P and MRP subunit p25, b.
    
 0.997
pop5
POP5 homolog, ribonuclease P/MRP subunit.
    
 0.997
pop4
POP4 homolog, ribonuclease P/MRP subunit.
    
 0.997
rpp30
Ribonuclease P/MRP subunit p30.
    
 0.996
ENSCHAP00000005016
Ribonuclease P/MRP 38 subunit.
    
 0.995
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.995
ENSCHAP00000053314
Ribonuclease P 21 subunit.
    
  0.995
ENSCHAP00000048679
Ribonuclease P/MRP 25 subunit-like.
    
 0.987
ENSCHAP00000018149
annotation not available
    
 0.962
nhp2
NHP2 ribonucleoprotein.
   
  0.948
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.