STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054807annotation not available (162 aa)    
Predicted Functional Partners:
ENSCHAP00000013054
annotation not available
  
 
0.782
ENSCHAP00000036402
annotation not available
    
 
0.781
LOC105900944
Transcription factor HES-1-like.
    
 
0.781
hes4
Hes family bHLH transcription factor 4.
    
 
0.781
ENSCHAP00000008930
annotation not available
    
0.766
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
     
 0.658
LOC105903551
Recombining binding protein suppressor of hairless-like.
     
 0.658
ENSCHAP00000000203
Hairy-related 12.
  
 
 
0.652
ENSCHAP00000008112
Hairy-related 8a.
    
 
0.627
HES2
Hes family bHLH transcription factor 2.
    
 
0.627
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.