STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054877protein-O-mannosyltransferase 1. (722 aa)    
Predicted Functional Partners:
ENSCHAP00000040153
protein-O-mannosyltransferase 2.
  
 
0.993
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.935
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.932
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
     
 0.932
ENSCHAP00000018538
Dystroglycan 1.
    
 0.931
pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
    
 0.859
ENSCHAP00000055846
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.849
ruvbl1
RuvB like AAA ATPase 1.
    
  0.839
ccdc47
Coiled-coil domain containing 47.
   
 
  0.824
wdr83os
WD repeat domain 83 opposite strand.
   
 
  0.821
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.