STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eif2dEukaryotic translation initiation factor 2D. (602 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
 0.996
rps3
Ribosomal protein S3.
    
 0.990
rpsa
Ribosomal protein SA.
    
 0.990
rps9
Ribosomal protein S9.
    
  0.988
ENSCHAP00000040378
Ribosomal protein S3A.
    
  0.988
rps25
Ribosomal protein S25.
    
 0.988
rps13
Ribosomal protein S13.
    
 0.988
ENSCHAP00000059020
Ribosomal protein S4 X-linked.
    
 0.988
rps18
Ribosomal protein S18.
    
  0.987
rps7
Ribosomal protein S7.
    
 0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.