STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000054922annotation not available (163 aa)    
Predicted Functional Partners:
LOC105894475
Platelet-activating factor acetylhydrolase-like.
     
 0.653
ENSCHAP00000026943
Mitogen-activated protein kinase 3.
    
  0.632
mapk1
Mitogen-activated protein kinase 1.
    
  0.632
ENSCHAP00000031823
Phospholipase A2, group XV.
     
 0.624
PNPLA7
Patatin like phospholipase domain containing 7.
   
 
 0.623
ENSCHAP00000014176
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.615
ENSCHAP00000007582
Phospholipase D2.
     
 0.610
LOC105903293
Docosahexaenoic acid omega-hydroxylase CYP4F3-like.
   
 
 0.609
ENSCHAP00000055050
Selenoprotein I.
     
 0.604
ENSCHAP00000003328
Choline phosphotransferase 1.
     
 0.603
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.