STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055087Inositol 1,4,5-trisphosphate receptor, type 1b. (2681 aa)    
Predicted Functional Partners:
PLCB4-2
Phospholipase C beta 4.
    
 0.897
PLCB2
Phospholipase C beta 2.
    
 0.897
calm1
Calmodulin.
    
 0.894
becn1
Beclin 1.
    
 0.887
ENSCHAP00000029416
Calmodulin-like 4a.
    
 0.885
CALML6
Calmodulin like 6.
    
 0.885
ENSCHAP00000009032
Phospholipase C, beta 3 (phosphatidylinositol-specific).
    
 0.882
ENSCHAP00000009232
Phospholipase C beta 1.
    
 0.882
ENSCHAP00000011360
Murine retrovirus integration site 1 homolog.
    
 0.882
PLCB1
Phospholipase C beta 1.
    
 0.881
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.