STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055322Transcription factor AP-2 beta. (469 aa)    
Predicted Functional Partners:
KCTD15
Potassium channel tetramerization domain containing 15.
    
 0.747
ENSCHAP00000015085
annotation not available
    
 0.747
ENSCHAP00000015104
Potassium channel tetramerization domain containing 1.
    
 0.747
KCTD1
Potassium channel tetramerization domain containing 1.
    
 0.747
yeats4
YEATS domain containing 4.
    
 0.725
ENSCHAP00000021733
annotation not available
    
 0.721
ENSCHAP00000021773
annotation not available
    
 0.721
LOC105888493
Nucleoplasmin ATPase-like.
   
  0.715
ENSCHAP00000022559
Nucleophosmin 1b.
   
  0.715
ENSCHAP00000000941
DEK proto-oncogene.
    
 0.714
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.