STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055464Ras association domain family member 9. (455 aa)    
Predicted Functional Partners:
ENSCHAP00000041079
Peptidylglycine alpha-amidating monooxygenase.
    
 
 0.582
ENSCHAP00000012422
Ras association domain family member 6.
      
 0.426
ENSCHAP00000012956
annotation not available
    
 
 0.415
ENSCHAP00000015292
annotation not available
    
 
 0.415
ENSCHAP00000015508
annotation not available
    
 
 0.415
ENSCHAP00000017898
Protein phosphatase 1, regulatory subunit 13Ba.
    
 
 0.415
ENSCHAP00000030355
Tumor protein p53 binding protein, 2a.
    
 
 0.415
ppp1r13b
Protein phosphatase 1 regulatory subunit 13B.
    
 
 0.415
ENSCHAP00000061488
Protein phosphatase 1, regulatory subunit 13 like.
    
 
 0.415
frmd6
FERM domain containing 6.
    
 
 0.403
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.