STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105911850Sodium/potassium-transporting ATPase subunit beta-233-like. (302 aa)    
Predicted Functional Partners:
ENSCHAP00000016503
ATPase Na+/K+ transporting subunit alpha 2.
   
 0.951
ENSCHAP00000047504
FXYD domain containing ion transport regulator 6.
    
 0.946
LOC105889580
Sodium/potassium-transporting ATPase subunit alpha-1.
   
 0.917
atp1a1
ATPase Na+/K+ transporting subunit alpha 1.
   
 0.917
ENSCHAP00000022139
annotation not available
   
 0.906
ENSCHAP00000057913
ATPase Na+/K+ transporting subunit alpha 3a.
   
 0.906
ATP4A
ATPase H+/K+ transporting subunit alpha.
   
 0.898
LOC105899109
cAMP-dependent protein kinase catalytic subunit beta.
   
 
  0.848
abcg8
ATP binding cassette subfamily G member 8.
   
 
  0.826
ENSCHAP00000046453
ATP-binding cassette, sub-family G (WHITE), member 5.
   
 
  0.826
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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