STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055796annotation not available (1162 aa)    
Predicted Functional Partners:
ENSCHAP00000016927
Si:ch211-175f11.5.
    
 0.820
PFN3
Profilin 3.
    
 0.742
pfn1
Profilin 1.
    
 0.742
ENSCHAP00000050775
annotation not available
    
 0.730
ENSCHAP00000050025
Kynurenine 3-monooxygenase.
    
 0.693
grtp1
Growth hormone regulated TBC protein 1.
   
 0.672
ENSCHAP00000008383
Myosin IXB.
    
 0.666
ENSCHAP00000038621
Myosin IXAa.
    
 0.666
LOC105910950
Growth arrest-specific protein 7-like.
    
 0.656
ENSCHAP00000050573
annotation not available
    
 0.656
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.