STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055846EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase. (523 aa)    
Predicted Functional Partners:
ENSCHAP00000018538
Dystroglycan 1.
    
 0.956
ENSCHAP00000004720
annotation not available
     
 0.904
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.904
ENSCHAP00000040153
protein-O-mannosyltransferase 2.
     
 0.849
ENSCHAP00000054877
protein-O-mannosyltransferase 1.
     
 0.849
LOC105899426
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
     
 0.731
ENSCHAP00000048226
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
     
 0.731
b3galnt2
beta-1,3-N-acetylgalactosaminyltransferase 2.
   
 
 0.705
TTC6
Tetratricopeptide repeat domain 6.
     
 0.701
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
     
 0.683
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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