STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
graspGeneral receptor for phosphoinositides 1 associated scaffold protein. (383 aa)    
Predicted Functional Partners:
ENSCHAP00000004032
annotation not available
    
 0.751
ENSCHAP00000033353
TNF receptor-associated factor 3 interacting protein 1.
    
 0.735
ift80
Intraflagellar transport 80.
    
 0.729
ENSCHAP00000025941
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.720
ENSCHAP00000041671
annotation not available
    
 0.720
ENSCHAP00000051208
annotation not available
    
 0.720
ENSCHAP00000010071
Intraflagellar transport 88 homolog.
    
 0.696
ENSCHAP00000024700
Clusterin associated protein 1.
    
 0.695
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
    
 0.684
ENSCHAP00000011806
Intraflagellar transport 172.
    
 0.668
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.