STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055905DnaJ (Hsp40) homolog, subfamily C, member 2. (638 aa)    
Predicted Functional Partners:
ENSCHAP00000022879
UBX domain protein 7.
   
 
  0.981
ENSCHAP00000019780
SAGA complex associated factor 29.
    
 0.967
ENSCHAP00000010647
Heat shock protein 14.
   
 0.943
gcn1
GCN1 activator of EIF2AK4.
   
 
 0.938
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
   
 
  0.925
ENSCHAP00000016901
Heat shock cognate 70-kd protein, tandem duplicate 3.
   
 0.922
HSPA8
Heat shock protein family A (Hsp70) member 8.
   
 0.922
LOC105903789
Heat shock cognate 70 kDa protein.
   
 0.922
HSPA8-2
Heat shock cognate 70 kDa protein-like.
   
 0.922
ENSCHAP00000042411
Heat shock cognate 70.
   
 0.922
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.